Cystine-capped CdSe@ZnS nanocomposites were synthesized mechanochemically with the aim to prepare a material which could be used in medicine for biosensing applications. Although synthesized CdSe@ZnS nanocomposites were capped with l-cysteine, cystine was formed from l-cysteine during the milling process. It was proven that water plays the key role in this oxidative transformation. The novel material was characterized by the complex of physico-chemical methods (FTIR, XPS, SEM, EDX, surface area measurements) and CHNS analysis. The leakage of Cd2+ and Zn2+ ions into physiological solution was also studied.